Information for 6-TTCTCCCACA (Motif 10)


Reverse Opposite:

p-value:1e-8
log p-value:-1.982e+01
Information Content per bp:1.856
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif620.5
Percentage of Background Sequences with motif1.47%
Average Position of motif in Targets384.9 +/- 222.2bp
Average Position of motif in Background398.1 +/- 296.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTCTCCCACA
CNGTCCTCCC---

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTCTCCCACA--
YCCGCCCACGCN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTCTCCCACA--
--CRCCCACGCA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTCTCCCACA
HTTTCCCASG

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTCTCCCACA---
CCCCCGCCCACGCAC

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCTCCCACA
-GCTCCG---

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTCTCCCACA---
-NWAACCACADNN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TTCTCCCACA-----
ATTTCCCAGVAKSCY

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TTCTCCCACA-
NCTTCCCGCCC

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TTCTCCCACA-
TGTCTGDCACCT