Information for 7-TGGCATAATC (Motif 11)


Reverse Opposite:

p-value:1e-8
log p-value:-1.961e+01
Information Content per bp:1.647
Number of Target Sequences with motif111.0
Percentage of Target Sequences with motif17.68%
Number of Background Sequences with motif4229.0
Percentage of Background Sequences with motif10.00%
Average Position of motif in Targets396.6 +/- 336.1bp
Average Position of motif in Background389.9 +/- 292.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------TGGCATAATC
NGTAGGTTGGCATNNN-

MA0102.3_CEBPA/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TGGCATAATC
ATTGCACAATA

MA0488.1_JUN/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TGGCATAATC--
ATGACATCATCNN

MA0466.1_CEBPB/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGGCATAATC
TATTGCACAAT-

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TGGCATAATC-------
---NNTAATCCNGNCNN

MA0161.1_NFIC/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGCATAATC
TTGGCA-----

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:TGGCATAATC--
----YTAATCCY

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---TGGCATAATC--
CAATTGCAAAAATAT

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGGCATAATC
ATTTGCATAA--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGGCATAATC
ATTGCATCAK-