Information for 9-AATAGCAGAGCT (Motif 12)


Reverse Opposite:

p-value:1e-8
log p-value:-1.891e+01
Information Content per bp:1.717
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.62%
Number of Background Sequences with motif541.7
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets314.2 +/- 195.4bp
Average Position of motif in Background383.9 +/- 305.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0483.1_Gfi1b/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AATAGCAGAGCT
-AAATCACAGCA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AATAGCAGAGCT--
----GCAGTGATTT

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AATAGCAGAGCT
-ATGCCAGACN-

PB0119.1_Foxa2_2/Jaspar

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---AATAGCAGAGCT
AAAAATAACAAACGG

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--AATAGCAGAGCT-
AAAWWTGCTGACWWD

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AATAGCAGAGCT
-----CGGAGC-

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AATAGCAGAGCT
-------CAGCC

PB0099.1_Zfp691_1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:AATAGCAGAGCT------
-CGAACAGTGCTCACTAT

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AATAGCAGAGCT
-AAACCACAGC-

MA0497.1_MEF2C/Jaspar

Match Rank:10
Score:0.50
Offset:-8
Orientation:forward strand
Alignment:--------AATAGCAGAGCT
ATGCTAAAAATAGAA-----