Information for 11-GGAACGATGT (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.766e+01
Information Content per bp:1.857
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif155.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets363.1 +/- 273.2bp
Average Position of motif in Background382.2 +/- 290.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0044.1_Homez/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGAACGATGT---
NNTAAAAACGATGTTNT

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGAACGATGT---
--AAGGATATNTN

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGAACGATGT---
-ACAGGATGTGGT

MA0081.1_SPIB/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGAACGATGT
AGAGGAA------

PB0181.1_Spdef_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--GGAACGATGT----
CTACTAGGATGTNNTN

MA0136.1_ELF5/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GGAACGATGT-
--AAGGAAGTA

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAACGATGT
GGAACAAAGR

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GGAACGATGT
DGATCRATAN

PB0063.1_Sox13_1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGAACGATGT---
TTAAGAACAATAAATT

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGAACGATGT-
AGGAAACAGCTG