Information for 14-TGCAAATACC (Motif 16)


Reverse Opposite:

p-value:1e-7
log p-value:-1.664e+01
Information Content per bp:1.830
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif3.03%
Number of Background Sequences with motif275.2
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets387.8 +/- 294.7bp
Average Position of motif in Background365.6 +/- 310.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAATACC
TTATGCAAAT---

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TGCAAATACC
ATATGCAAAT---

MA0507.1_POU2F2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TGCAAATACC
ATATGCAAATNNN

PH0145.1_Pou2f3/Jaspar

Match Rank:4
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAATACC-
TTGTATGCAAATTAGA

PH0144.1_Pou2f2/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----TGCAAATACC-
TTGTATGCAAATTAGA

MA0157.1_FOXO3/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCAAATACC
TGTAAACA--

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.65
Offset:-7
Orientation:forward strand
Alignment:-------TGCAAATACC
NNNVCTGWGYAAACASN

MA0107.1_RELA/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TGCAAATACC-
-GGAAATTCCC

MA0105.3_NFKB1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCAAATACC-
GGGAAATTCCC

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCAAATACC-
-GGAAATTCCC