Information for 11-GATGTCAGGRCK (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.607e+01
Information Content per bp:1.809
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.91%
Number of Background Sequences with motif106.0
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets371.2 +/- 268.4bp
Average Position of motif in Background386.1 +/- 339.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GATGTCAGGRCK
VBTGWCAGCB--

MA0155.1_INSM1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GATGTCAGGRCK--
--TGTCAGGGGGCG

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GATGTCAGGRCK--
NNTNNTGTCTGGNNTNG

PH0164.1_Six4/Jaspar

Match Rank:4
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GATGTCAGGRCK
TNNNNGGTGTCATNTNT

MA0067.1_Pax2/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GATGTCAGGRCK
--AGTCACGC--

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GATGTCAGGRCK
GGTGYTGACAGS---

MA0488.1_JUN/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GATGTCAGGRCK
AAGATGATGTCAT----

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:8
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GATGTCAGGRCK
---GTCATN---

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----GATGTCAGGRCK
NRRTGACGTCAT----

MA0498.1_Meis1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GATGTCAGGRCK--
AGCTGTCACTCACCT