Information for 18-GCAGKSCCTG (Motif 19)


Reverse Opposite:

p-value:1e-6
log p-value:-1.511e+01
Information Content per bp:1.844
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif5.10%
Number of Background Sequences with motif764.5
Percentage of Background Sequences with motif1.81%
Average Position of motif in Targets525.6 +/- 360.3bp
Average Position of motif in Background414.7 +/- 379.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCAGKSCCTG-
-CACTTCCTGT

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCAGKSCCTG-
-CACTTCCTGT

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAGKSCCTG-
-CTGTTCCTGG

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAGKSCCTG--
--ATTTCCTGTN

MA0156.1_FEV/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GCAGKSCCTG
--ATTTCCTG

MA0146.2_Zfx/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAGKSCCTG-----
-CAGGCCNNGGCCNN

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCAGKSCCTG-
-CACTTCCTCT

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GCAGKSCCTG-
NNNANTGCAGTGCNNTT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAGKSCCTG--
--ACATCCTGNT

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GCAGKSCCTG--
------GCTGTG