| p-value: | 1e-10 |
| log p-value: | -2.474e+01 |
| Information Content per bp: | 1.694 |
| Number of Target Sequences with motif | 72.0 |
| Percentage of Target Sequences with motif | 11.46% |
| Number of Background Sequences with motif | 2035.6 |
| Percentage of Background Sequences with motif | 4.81% |
| Average Position of motif in Targets | 345.7 +/- 243.8bp |
| Average Position of motif in Background | 384.7 +/- 251.8bp |
| Strand Bias (log2 ratio + to - strand density) | -0.4 |
| Multiplicity (# of sites on avg that occur together) | 1.22 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
| Match Rank: | 1 |
| Score: | 0.89
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | TAATTAGCAC
TAATTAGN-- |
|
|
|
PB0031.1_Hoxa3_1/Jaspar
| Match Rank: | 2 |
| Score: | 0.89
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TAATTAGCAC--
GTTAATTANCTCNN |
|
|
|
PH0081.1_Pdx1/Jaspar
| Match Rank: | 3 |
| Score: | 0.88
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TAATTAGCAC--
AAGGTAATTAGCTCAT |
|
|
|
PH0131.1_Pax4/Jaspar
| Match Rank: | 4 |
| Score: | 0.86
| | Offset: | -5
| | Orientation: | forward strand |
| Alignment: | -----TAATTAGCAC--
TGAACTAATTAGCCCAC |
|
|
|
PH0050.1_Hoxa3/Jaspar
| Match Rank: | 5 |
| Score: | 0.86
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TAATTAGCAC--
ACTAATTANCNCNA |
|
|
|
PH0045.1_Hoxa1/Jaspar
| Match Rank: | 6 |
| Score: | 0.85
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----TAATTAGCAC--
ACGGTAATTAGCTCAG |
|
|
|
PH0036.1_Gsx2/Jaspar
| Match Rank: | 7 |
| Score: | 0.85
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TAATTAGCAC--
AGGTTAATTAGCTGAT |
|
|
|
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 8 |
| Score: | 0.85
| | Offset: | -3
| | Orientation: | forward strand |
| Alignment: | ---TAATTAGCAC
ADBTAATTAR--- |
|
|
|
PH0133.1_Pax7/Jaspar
| Match Rank: | 9 |
| Score: | 0.85
| | Offset: | -6
| | Orientation: | reverse strand |
| Alignment: | ------TAATTAGCAC-
NNNTNCTAATTAGNTCN |
|
|
|
PH0060.1_Hoxb5/Jaspar
| Match Rank: | 10 |
| Score: | 0.85
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----TAATTAGCAC--
ACGGTAATTAGCTCAT |
|
|
|
