Information for 13-TGCAGGAATATT (Motif 23)


Reverse Opposite:

p-value:1e-5
log p-value:-1.314e+01
Information Content per bp:1.701
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif3.50%
Number of Background Sequences with motif452.1
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets346.8 +/- 252.6bp
Average Position of motif in Background375.1 +/- 282.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCAGGAATATT
-CCWGGAATGY-

HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCAGGAATATT------
NNTTCTGGAANNTTCTAGAA

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGCAGGAATATT
-NCTGGAATGC-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGCAGGAATATT
-CCWGGAATGY-

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCAGGAATATT--
NNTNNCAATATTAG

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCAGGAATATT---
TTCTAGAABNTTCTA

MA0486.1_HSF1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCAGGAATATT--
CTTCTAGAAGGTTCT

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGCAGGAATATT
CAATTGCAAAAATAT-

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TGCAGGAATATT
NNNCTTTCCAGGAAA---

MA0090.1_TEAD1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCAGGAATATT
CNGAGGAATGTG