Information for 14-CCGGCGGCCGGA (Motif 24)


Reverse Opposite:

p-value:1e-5
log p-value:-1.313e+01
Information Content per bp:1.696
Number of Target Sequences with motif188.0
Percentage of Target Sequences with motif29.94%
Number of Background Sequences with motif9288.6
Percentage of Background Sequences with motif21.96%
Average Position of motif in Targets521.8 +/- 316.0bp
Average Position of motif in Background403.9 +/- 469.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.45
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0469.1_E2F3/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCGGCGGCCGGA-
NNGTGNGGGCGGGAG

MA0028.1_ELK1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCGGCGGCCGGA--
----GAGCCGGAAG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:forward strand
Alignment:CCGGCGGCCGGA---
-----GGCGGGAARN

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCGGCGGCCGGA----
------RCCGGAARYN

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCGGCGGCCGGA----
------RCCGGAAGTD

MA0470.1_E2F4/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCGGCGGCCGGA---
----GGGCGGGAAGG

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CCGGCGGCCGGA----
------DCCGGAARYN

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CCGGCGGCCGGA---
-----GGCGGGAAAH

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCGGCGGCCGGA-
---CWGGCGGGAA

MA0076.2_ELK4/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCGGCGGCCGGA-----
------NCCGGAAGTGG