Information for 15-GAGGAGGCGGCK (Motif 25)


Reverse Opposite:

p-value:1e-5
log p-value:-1.312e+01
Information Content per bp:1.450
Number of Target Sequences with motif170.0
Percentage of Target Sequences with motif27.07%
Number of Background Sequences with motif8210.8
Percentage of Background Sequences with motif19.41%
Average Position of motif in Targets524.4 +/- 327.0bp
Average Position of motif in Background395.0 +/- 482.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGGCGGCK-
GGCGGGGGCGGGGG

PB0010.1_Egr1_1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GAGGAGGCGGCK
ANTGCGGGGGCGGN-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GAGGAGGCGGCK
--GGGGGGGG--

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAGGAGGCGGCK-
GGGNGGGGGCGGGGC

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GAGGAGGCGGCK--
NNNAAGGGGGCGGGNNN

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGGCGGCK
GGGGGCGGGGC--

PB0097.1_Zfp281_1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAGGCGGCK--
GGGGGGGGGGGGGGA

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGCGGCK
ACAGGATGTGGT-

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GAGGAGGCGGCK
AGGGGGCGGGGCTG

MA0528.1_ZNF263/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAGGAGGCGGCK--------
GGAGGAGGAGGGGGAGGAGGA