Information for 23-GCTGATTCTA (Motif 28)


Reverse Opposite:

p-value:1e-3
log p-value:-9.154e+00
Information Content per bp:1.808
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.18%
Number of Background Sequences with motif508.3
Percentage of Background Sequences with motif1.20%
Average Position of motif in Targets335.3 +/- 320.7bp
Average Position of motif in Background369.7 +/- 334.3bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0117.1_Mafb/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCTGATTCTA
GCTGACGC--

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCTGATTCTA
TGCTGAGTCA-

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCTGATTCTA
TGCTGACTCA-

MA0496.1_MAFK/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGATTCTA
AAANTGCTGACTNAG

MA0495.1_MAFF/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------GCTGATTCTA-
NAAAANTGCTGACTCAGC

MA0479.1_FOXH1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTGATTCTA
TGTGGATTNNN

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCTGATTCTA
NNTGTGGATTSS-

Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GCTGATTCTA
AWWNTGCTGAGTCAT

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTGATTCTA
HTGCTGAGTCAT

PB0125.1_Gata3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCTGATTCTA--------
TTTTGTAGATTTTATCGACTTA