Information for 10-GACACACT (Motif 30)


Reverse Opposite:

p-value:1e-2
log p-value:-6.792e+00
Information Content per bp:1.955
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.85%
Number of Background Sequences with motif1754.1
Percentage of Background Sequences with motif4.15%
Average Position of motif in Targets469.5 +/- 330.7bp
Average Position of motif in Background395.8 +/- 335.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GACACACT---
AGCGGCACACACGCAA

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GACACACT-----
CTCACACAATGGCGC

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GACACACT---
ATAAATGACACCTATCA

MA0099.2_JUN::FOS/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GACACACT
TGACTCA--

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GACACACT---
-AASCACTCAA

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GACACACT---
GGCCACACCCAN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GACACACT--
GCCACACCCA

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GACACACT
--CACGCA

MA0477.1_FOSL1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GACACACT
NATGAGTCACC

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GACACACT------
GTCACGCTCNCTGA