Information for 24-AGGCATCGGCAG (Motif 32)


Reverse Opposite:

p-value:1e-1
log p-value:-4.217e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.16%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets409.0 +/- 47.4bp
Average Position of motif in Background399.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGCATCGGCAG-
CAGGCCNNGGCCNN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGCATCGGCAG
AGGCCTNG----

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AGGCATCGGCAG
AGGCCTAG----

MA0117.1_Mafb/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGGCATCGGCAG
--NCGTCAGC--

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGGCATCGGCAG
AGGAAACAGCTG

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----AGGCATCGGCAG
GCGGAGGTGTCGCCTC

MF0001.1_ETS_class/Jaspar

Match Rank:7
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGGCATCGGCAG
----ACCGGAAG

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--AGGCATCGGCAG
ACATGCCCGGGCAT

MA0522.1_Tcf3/Jaspar

Match Rank:9
Score:0.49
Offset:1
Orientation:forward strand
Alignment:AGGCATCGGCAG
-CACAGCTGCAG

PB0150.1_Mybl1_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AGGCATCGGCAG-------
----CACGGCAGTTGGTNN