Information for 6-GACCGCGCGCGC (Motif 6)


Reverse Opposite:

p-value:1e-8
log p-value:-2.059e+01
Information Content per bp:1.761
Number of Target Sequences with motif173.0
Percentage of Target Sequences with motif27.55%
Number of Background Sequences with motif7532.0
Percentage of Background Sequences with motif17.81%
Average Position of motif in Targets482.5 +/- 302.1bp
Average Position of motif in Background371.3 +/- 472.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.51
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0095.1_Zfp161_1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GACCGCGCGCGC--
NCANGCGCGCGCGCCA

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:GACCGCGCGCGC---
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GACCGCGCGCGC------
---ANCGCGCGCCCTTNN

MA0506.1_NRF1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GACCGCGCGCGC
GCGCCTGCGCA-

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACCGCGCGCGC---
-TCCGCCCCCGCATT

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GACCGCGCGCGC-
-----GGCGCGCT

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GACCGCGCGCGC-
NNGCNCTGCGCGGC

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GACCGCGCGCGC
ATGCCCGGGCATGT

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GACCGCGCGCGC--
TCGACCCCGCCCCTAT

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GACCGCGCGCGC--
--CTGCGCATGCGC