| p-value: | 1e-8 |
| log p-value: | -2.045e+01 |
| Information Content per bp: | 1.873 |
| Number of Target Sequences with motif | 10.0 |
| Percentage of Target Sequences with motif | 1.59% |
| Number of Background Sequences with motif | 42.8 |
| Percentage of Background Sequences with motif | 0.10% |
| Average Position of motif in Targets | 319.5 +/- 175.2bp |
| Average Position of motif in Background | 377.3 +/- 237.0bp |
| Strand Bias (log2 ratio + to - strand density) | 0.3 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
| Match Rank: | 1 |
| Score: | 0.66
| | Offset: | 3
| | Orientation: | reverse strand |
| Alignment: | TTCTTTGGCAAA
---CTTGGCAA- |
|
|
|
MA0161.1_NFIC/Jaspar
| Match Rank: | 2 |
| Score: | 0.64
| | Offset: | 4
| | Orientation: | forward strand |
| Alignment: | TTCTTTGGCAAA
----TTGGCA-- |
|
|
|
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer
| Match Rank: | 3 |
| Score: | 0.62
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | TTCTTTGGCAAA
TTCTNMGGAA-- |
|
|
|
MA0520.1_Stat6/Jaspar
| Match Rank: | 4 |
| Score: | 0.62
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TTCTTTGGCAAA-
ANTTCTCAGGAANNN |
|
|
|
PB0145.1_Mafb_2/Jaspar
| Match Rank: | 5 |
| Score: | 0.61
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTCTTTGGCAAA--
ANATTTTTGCAANTN |
|
|
|
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer
| Match Rank: | 6 |
| Score: | 0.60
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --TTCTTTGGCAAA-
CATTGTTATGCAAAT |
|
|
|
MA0142.1_Pou5f1::Sox2/Jaspar
| Match Rank: | 7 |
| Score: | 0.60
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TTCTTTGGCAAA-
CTTTGTTATGCAAAT |
|
|
|
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer
| Match Rank: | 8 |
| Score: | 0.59
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------TTCTTTGGCAAA
NNTGTTTATTTTGGCA-- |
|
|
|
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer
| Match Rank: | 9 |
| Score: | 0.58
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --TTCTTTGGCAAA
ANTTCTNNAGAA-- |
|
|
|
PH0144.1_Pou2f2/Jaspar
| Match Rank: | 10 |
| Score: | 0.56
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -TTCTTTGGCAAA---
TNTAATTTGCATANNN |
|
|
|
