Information for 4-CGGTGCGATC (Motif 8)


Reverse Opposite:

p-value:1e-8
log p-value:-2.041e+01
Information Content per bp:1.454
Number of Target Sequences with motif136.0
Percentage of Target Sequences with motif21.66%
Number of Background Sequences with motif5492.2
Percentage of Background Sequences with motif12.99%
Average Position of motif in Targets532.3 +/- 331.8bp
Average Position of motif in Background407.3 +/- 473.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGCGATC----
NCGACCGCTCCGCTCGAAA

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGGTGCGATC
CGGAGC----

MA0019.1_Ddit3::Cebpa/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CGGTGCGATC--
AGATGCAATCCC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGTGCGATC
NTGGGTGTGGCC

MA0493.1_Klf1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGCGATC
TGGGTGTGGCN

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.53
Offset:-7
Orientation:reverse strand
Alignment:-------CGGTGCGATC
NNNANTGCAGTGCNNTT

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGGTGCGATC
AGGTGTCA--

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CGGTGCGATC
-GGCGCGCT-

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.52
Offset:-6
Orientation:forward strand
Alignment:------CGGTGCGATC-
ATCCACAGGTGCGAAAA

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGGTGCGATC
GCTGTG-----