Homer de novo Motif Results (2a_Meth_k3/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 708
Total background sequences = 48926
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 1e-57-1.319e+0223.45%5.41%236.1bp (224.1bp)MA0509.1_Rfx1/Jaspar(0.891)
More Information | Similar Motifs Found		motif file (matrix)
2 1e-42-9.833e+0137.15%15.75%238.4bp (225.3bp)AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.986)
More Information | Similar Motifs Found		motif file (matrix)
3 1e-25-5.987e+0137.99%20.49%256.4bp (231.9bp)Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer(0.844)
More Information | Similar Motifs Found		motif file (matrix)
4 1e-24-5.617e+0155.08%36.00%278.2bp (229.7bp)Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer(0.909)
More Information | Similar Motifs Found		motif file (matrix)
5 1e-19-4.531e+0157.77%40.55%268.7bp (231.8bp)MA0442.1_SOX10/Jaspar(0.811)
More Information | Similar Motifs Found		motif file (matrix)
6 1e-17-3.960e+0117.94%7.93%257.8bp (240.7bp)MA0483.1_Gfi1b/Jaspar(0.769)
More Information | Similar Motifs Found		motif file (matrix)
7 1e-15-3.498e+0152.97%38.06%300.7bp (236.9bp)PB0042.1_Mafk_1/Jaspar(0.642)
More Information | Similar Motifs Found		motif file (matrix)
8 1e-12-2.985e+0129.94%18.48%296.5bp (229.7bp)PH0150.1_Pou4f3/Jaspar(0.767)
More Information | Similar Motifs Found		motif file (matrix)
9 1e-12-2.947e+0113.84%6.20%239.7bp (232.9bp)TATA-Box(TBP)/Promoter/Homer(0.628)
More Information | Similar Motifs Found		motif file (matrix)
10 1e-12-2.905e+0122.74%12.79%280.2bp (235.9bp)POL013.1_MED-1/Jaspar(0.592)
More Information | Similar Motifs Found		motif file (matrix)
11 1e-12-2.786e+0110.17%3.97%295.7bp (233.7bp)PB0091.1_Zbtb3_1/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
12 *1e-11-2.680e+0130.51%19.53%289.3bp (233.1bp)PH0006.1_Barhl2/Jaspar(0.690)
More Information | Similar Motifs Found		motif file (matrix)
13 *1e-11-2.644e+0146.33%33.77%296.2bp (231.0bp)MA0089.1_NFE2L1::MafG/Jaspar(0.774)
More Information | Similar Motifs Found		motif file (matrix)
14 *1e-11-2.534e+0116.95%8.92%282.5bp (232.0bp)MA0597.1_THAP1/Jaspar(0.705)
More Information | Similar Motifs Found		motif file (matrix)
15 *1e-10-2.325e+0134.75%23.98%261.7bp (244.2bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.769)
More Information | Similar Motifs Found		motif file (matrix)
16 *1e-10-2.303e+013.53%0.70%257.3bp (230.2bp)EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer(0.692)
More Information | Similar Motifs Found		motif file (matrix)
17 *1e-9-2.295e+015.08%1.42%273.5bp (226.2bp)Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer(0.766)
More Information | Similar Motifs Found		motif file (matrix)
18 *1e-9-2.106e+0158.76%47.33%283.5bp (228.6bp)POL009.1_DCE_S_II/Jaspar(0.800)
More Information | Similar Motifs Found		motif file (matrix)
19 *1e-9-2.094e+0126.55%17.40%272.2bp (233.3bp)MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer(0.758)
More Information | Similar Motifs Found		motif file (matrix)
20 *1e-8-1.871e+0112.43%6.52%321.9bp (228.2bp)PB0208.1_Zscan4_2/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
21 *1e-7-1.712e+017.34%3.17%257.2bp (229.0bp)MA0025.1_NFIL3/Jaspar(0.878)
More Information | Similar Motifs Found		motif file (matrix)
22 *1e-7-1.690e+011.41%0.13%263.5bp (217.7bp)POL011.1_XCPE1/Jaspar(0.746)
More Information | Similar Motifs Found		motif file (matrix)
23 *1e-7-1.629e+016.92%2.98%241.7bp (235.7bp)MA0502.1_NFYB/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
24 *1e-4-1.060e+0149.58%41.94%290.6bp (228.0bp)MA0498.1_Meis1/Jaspar(0.821)
More Information | Similar Motifs Found		motif file (matrix)
25 *1e-4-1.013e+0131.92%25.25%267.3bp (220.3bp)Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer(0.864)
More Information | Similar Motifs Found		motif file (matrix)
26 *1e-3-8.117e+0011.02%7.37%265.5bp (224.3bp)PB0128.1_Gcm1_2/Jaspar(0.720)
More Information | Similar Motifs Found		motif file (matrix)
27 *1e-1-4.242e+000.14%0.00%75.2bp (128.0bp)PB0151.1_Myf6_2/Jaspar(0.562)
More Information | Similar Motifs Found		motif file (matrix)
28 *1e-1-3.861e+000.42%0.08%111.6bp (257.9bp)Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer(0.631)
More Information | Similar Motifs Found		motif file (matrix)
29 *1e-1-3.693e+001.13%0.49%198.8bp (215.9bp)PB0122.1_Foxk1_2/Jaspar(0.579)
More Information | Similar Motifs Found		motif file (matrix)