Homer Known Motif Enrichment Results (4a_Sal_k3)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 12267, Total Background Sequences = 37073
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-372-8.569e+020.00003999.032.60%6387.717.23%motif file (matrix) pdf
2Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-355-8.182e+020.00002869.023.39%3944.910.64%motif file (matrix) pdf
3Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-352-8.124e+020.00004460.036.36%7635.720.59%motif file (matrix) pdf
4Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-338-7.785e+020.00002296.018.72%2851.37.69%motif file (matrix) pdf
5RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-331-7.635e+020.00001252.010.21%1024.22.76%motif file (matrix) pdf
6Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-330-7.600e+020.00001344.010.96%1170.73.16%motif file (matrix) pdf
7BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-308-7.108e+020.00004361.035.56%7719.220.82%motif file (matrix) pdf
8AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-292-6.734e+020.00004701.038.33%8716.623.51%motif file (matrix) pdf
9X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-264-6.086e+020.00001345.010.97%1372.83.70%motif file (matrix) pdf
10Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-238-5.493e+020.00006558.053.47%14357.338.72%motif file (matrix) pdf
11Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-237-5.476e+020.00002938.023.95%4811.312.98%motif file (matrix) pdf
12Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-202-4.655e+020.00001875.015.29%2677.97.22%motif file (matrix) pdf
13Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-201-4.651e+020.00002692.021.95%4501.212.14%motif file (matrix) pdf
14Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-183-4.230e+020.00004271.034.82%8620.123.25%motif file (matrix) pdf
15NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-178-4.106e+020.00005407.044.08%11778.431.77%motif file (matrix) pdf
16Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-156-3.607e+020.00001644.013.40%2460.26.64%motif file (matrix) pdf
17Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-144-3.332e+020.00008884.072.43%22770.461.41%motif file (matrix) pdf
18Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-102-2.354e+020.00007290.059.44%18446.149.75%motif file (matrix) pdf
19Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer1e-100-2.314e+020.00001218.09.93%1912.15.16%motif file (matrix) pdf
20NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-100-2.306e+020.00007649.062.36%19588.852.83%motif file (matrix) pdf
21Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-59-1.370e+020.00002467.020.11%5434.214.66%motif file (matrix) pdf
22NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-52-1.206e+020.0000506.04.13%718.81.94%motif file (matrix) pdf
23Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-40-9.273e+010.0000441.03.60%660.41.78%motif file (matrix) pdf
24SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-39-9.015e+010.000011667.095.12%34159.192.13%motif file (matrix) pdf
25Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-35-8.101e+010.00004694.038.27%12205.132.92%motif file (matrix) pdf
26MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-30-6.943e+010.00003945.032.16%10179.227.45%motif file (matrix) pdf
27Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-30-6.939e+010.00002437.019.87%5914.415.95%motif file (matrix) pdf
28Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-30-6.931e+010.0000388.03.16%619.21.67%motif file (matrix) pdf
29MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-30-6.924e+010.00001472.012.00%3302.48.91%motif file (matrix) pdf
30NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-30-6.922e+010.00002022.016.49%4777.512.88%motif file (matrix) pdf
31Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-26-6.165e+010.00002097.017.10%5056.213.64%motif file (matrix) pdf
32Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-26-6.147e+010.00001201.09.79%2651.47.15%motif file (matrix) pdf
33NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-24-5.639e+010.00003803.031.01%9944.026.82%motif file (matrix) pdf
34PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-22-5.240e+010.00002260.018.43%5608.515.13%motif file (matrix) pdf
35CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-22-5.215e+010.00003163.025.79%8162.622.01%motif file (matrix) pdf
36MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-22-5.175e+010.00004919.040.11%13275.135.80%motif file (matrix) pdf
37MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-21-4.943e+010.00004089.033.34%10876.629.33%motif file (matrix) pdf
38STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-21-4.883e+010.00002630.021.44%6691.218.05%motif file (matrix) pdf
39Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-20-4.661e+010.00006564.053.52%18282.249.31%motif file (matrix) pdf
40Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-20-4.638e+010.00007855.064.04%22229.359.95%motif file (matrix) pdf
41Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-19-4.484e+010.00003537.028.84%9344.325.20%motif file (matrix) pdf
42CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-18-4.271e+010.00002518.020.53%6456.617.41%motif file (matrix) pdf
43RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-17-4.029e+010.00001893.015.43%4731.012.76%motif file (matrix) pdf
44Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-15-3.621e+010.00001283.010.46%3096.78.35%motif file (matrix) pdf
45STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-15-3.586e+010.00002486.020.27%6464.317.43%motif file (matrix) pdf
46Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-15-3.586e+010.00004526.036.90%12391.033.42%motif file (matrix) pdf
47Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-15-3.514e+010.00009502.077.47%27568.374.35%motif file (matrix) pdf
48Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-14-3.266e+010.00007410.060.42%21127.856.98%motif file (matrix) pdf
49Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-13-3.197e+010.00005640.045.98%15784.442.57%motif file (matrix) pdf
50STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-13-3.194e+010.00004198.034.23%11500.331.02%motif file (matrix) pdf
51Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-13-3.036e+010.00003062.024.97%8211.622.15%motif file (matrix) pdf
52Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-12-2.856e+010.00007578.061.79%21731.958.61%motif file (matrix) pdf
53NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-11-2.762e+010.0000848.06.91%2008.15.42%motif file (matrix) pdf
54GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-10-2.531e+010.00001404.011.45%3564.09.61%motif file (matrix) pdf
55CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski et al.)/Homer1e-10-2.521e+010.00001023.08.34%2510.26.77%motif file (matrix) pdf
56REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-10-2.472e+010.000076.00.62%96.30.26%motif file (matrix) pdf
57Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-10-2.452e+010.0000864.07.04%2084.85.62%motif file (matrix) pdf
58OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-10-2.385e+010.0000803.06.55%1926.25.20%motif file (matrix) pdf
59Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-9-2.186e+010.00001380.011.25%3547.79.57%motif file (matrix) pdf
60c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-9-2.180e+010.00001374.011.20%3531.19.52%motif file (matrix) pdf
61ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-9-2.166e+010.0000579.04.72%1347.33.63%motif file (matrix) pdf
62Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-9-2.136e+010.00006909.056.33%19869.053.59%motif file (matrix) pdf
63JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-8-1.904e+010.0000441.03.60%1006.12.71%motif file (matrix) pdf
64BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-7-1.781e+010.00001242.010.13%3222.88.69%motif file (matrix) pdf
65E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-7-1.706e+010.00006057.049.38%17411.246.96%motif file (matrix) pdf
66Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-7-1.666e+010.00003363.027.42%9387.725.32%motif file (matrix) pdf
67Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer1e-7-1.653e+010.00003085.025.15%8573.023.12%motif file (matrix) pdf
68Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-6-1.557e+010.00004054.033.05%11461.630.91%motif file (matrix) pdf
69Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-6-1.490e+010.00001109.09.04%2895.17.81%motif file (matrix) pdf
70CHR(?)/Hela-CellCycle-Expression/Homer1e-6-1.475e+010.00002527.020.60%6984.318.84%motif file (matrix) pdf
71TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-6-1.419e+010.00003664.029.87%10345.227.90%motif file (matrix) pdf
72AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-5-1.344e+010.000011052.090.11%32924.788.80%motif file (matrix) pdf
73STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-5-1.343e+010.00001585.012.92%4282.311.55%motif file (matrix) pdf
74HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-5-1.307e+010.00001201.09.79%3189.78.60%motif file (matrix) pdf
75TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-5-1.290e+010.00002744.022.37%7669.520.68%motif file (matrix) pdf
76CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-5-1.256e+010.00001329.010.84%3565.49.62%motif file (matrix) pdf
77CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-5-1.170e+010.0000585.04.77%1477.63.99%motif file (matrix) pdf
78ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-4-1.086e+010.00016653.054.24%19423.452.39%motif file (matrix) pdf
79E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-4-1.054e+010.00011749.014.26%4825.413.01%motif file (matrix) pdf
80TATA-Box(TBP)/Promoter/Homer1e-4-1.025e+010.00015225.042.60%15139.640.83%motif file (matrix) pdf
81Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-4-9.884e+000.00027108.057.95%20842.956.21%motif file (matrix) pdf
82HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-4-9.788e+000.0002857.06.99%2273.26.13%motif file (matrix) pdf
83EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-4-9.670e+000.00021083.08.83%2922.07.88%motif file (matrix) pdf
84RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer1e-4-9.635e+000.0002625.05.10%1620.64.37%motif file (matrix) pdf
85GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-4-9.237e+000.0003810.06.60%2150.45.80%motif file (matrix) pdf
86Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-3-8.970e+000.00042324.018.95%6553.317.67%motif file (matrix) pdf
87ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-3-7.776e+000.0013228.01.86%548.21.48%motif file (matrix) pdf
88Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-3-7.635e+000.00145639.045.98%16496.544.49%motif file (matrix) pdf
89AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-3-7.586e+000.00156225.050.75%18267.349.27%motif file (matrix) pdf
90MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer1e-3-7.418e+000.00181028.08.38%2815.37.59%motif file (matrix) pdf
91BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-3-7.386e+000.00185958.048.58%17470.747.12%motif file (matrix) pdf
92CRE(bZIP)/Promoter/Homer1e-2-6.601e+000.0039880.07.17%2408.66.50%motif file (matrix) pdf
93IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-2-6.589e+000.0039559.04.56%1488.74.02%motif file (matrix) pdf
94PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-2-6.281e+000.0053908.07.40%2497.16.73%motif file (matrix) pdf
95Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-2-5.949e+000.00724057.033.08%11826.431.90%motif file (matrix) pdf
96Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-2-5.389e+000.01262877.023.46%8330.122.47%motif file (matrix) pdf
97Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-2-5.306e+000.01359875.080.51%29505.179.58%motif file (matrix) pdf
98Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-2-5.081e+000.01671367.011.15%3873.810.45%motif file (matrix) pdf
99PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-2-4.936e+000.01921771.014.44%5069.413.67%motif file (matrix) pdf