Information for 7-GGAACAAT (Motif 12)

A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T
Reverse Opposite:
C G T A C G A T A C G T T A C G G A C T C G A T A T G C G T A C
p-value:1e-14
log p-value:-3.331e+01
Information Content per bp:1.791
Number of Target Sequences with motif314.0
Percentage of Target Sequences with motif43.25%
Number of Background Sequences with motif14385.5
Percentage of Background Sequences with motif29.54%
Average Position of motif in Targets461.0 +/- 310.9bp
Average Position of motif in Background413.5 +/- 251.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.31
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0173.1_Sox21_2/Jaspar

Match Rank:1
Score:0.87
Offset:-4
Orientation:reverse strand
Alignment:----GGAACAAT-----
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0072.1_Sox5_1/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:forward strand
Alignment:---GGAACAAT-----
TTTAGAACAATAAAAT
 A C G T A C G T A C G T A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

SOX8/MA0868.2/Jaspar

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GGAACAAT--
AGAACAATGG
 A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T
T G C A C T A G C T G A C G T A A G T C C G T A G T C A G C A T C T A G T A C G

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.83
Offset:-4
Orientation:forward strand
Alignment:----GGAACAAT-----
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

MF0011.1_HMG_class/Jaspar

Match Rank:5
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:GGAACAAT
--AACAAT
 A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T
A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0063.1_Sox13_1/Jaspar

Match Rank:6
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---GGAACAAT-----
TTAAGAACAATAAATT
 A C G T A C G T A C G T A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--GGAACAAT------
AATGAACAATGGAATT
 A C G T A C G T A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

SOX14/MA1562.1/Jaspar

Match Rank:8
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-GGAACAAT-
CCGAACAATG
 A C G T A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T
T G A C G A T C C A T G C G T A G C T A A G T C C G T A G T C A A C G T C A T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:9
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGAACAAT--
RNAACAATGG
 A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0065.1_Sox15_1/Jaspar

Match Rank:10
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---GGAACAAT------
TAGTGAACAATAGATTT
 A C G T A C G T A C G T A C T G A T C G G C T A C T G A A T G C C G T A G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C A T G C G A T C A T G C T G A C G T A G A T C C G T A C G T A G C A T C G T A C T A G C T G A A G C T G C A T A C G T