Information for 9-TGCAGAAAAAGA (Motif 18)

C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A
Reverse Opposite:
G C A T A G T C G C A T C G A T C G A T G C A T C A G T T A G C G C A T T C A G G T A C G T C A
p-value:1e-12
log p-value:-2.869e+01
Information Content per bp:1.710
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif5.79%
Number of Background Sequences with motif733.0
Percentage of Background Sequences with motif1.50%
Average Position of motif in Targets391.2 +/- 243.9bp
Average Position of motif in Background422.2 +/- 249.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGCAGAAAAAGA
CAATTGCAAAAATAT-
 A C G T A C G T A C G T A C G T C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T

Stat2/MA1623.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGCAGAAAAAGA----
---AGAAACAGAAACT
 C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G C T G A G C T A T C G A T A G C G C T A C T A G T C G A C T G A T C G A T A G C G C A T

PRDM1/MA0508.3/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TGCAGAAAAAGA-
--NAGAGAAAGNA
 C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A A C G T
A C G T A C G T C T G A C T G A C A T G G C T A C A T G G C T A C G T A G C T A C A T G C G T A C T G A

ZBTB26/MA1579.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TGCAGAAAAAGA
TACTCCAGAAAAGAT
 A C G T A C G T A C G T C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A
C A G T C G T A G A T C C G A T T G A C A G T C C T G A C T A G G T C A T C G A T G C A T G C A T C A G G T C A G A C T

PRDM4/MA1647.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCAGAAAAAGA-
--NAGAAACAGNN
 C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A A C G T
A C G T A C G T C G A T C G T A C A T G C G T A T C G A C G T A A G T C G C T A A T C G G T C A G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCAGAAAAAGA---
AAACAGACAAAGGAAT
 A C G T C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

GATA4/MA0482.2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGCAGAAAAAGA-
-NNAGATAAGGNN
 C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A A C G T
A C G T C G T A T C G A C G T A T C A G C G T A C A G T C G T A C G T A C T A G T C A G C G T A C G T A

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TGCAGAAAAAGA
ATTTGCATACAATGG
 A C G T A C G T A C G T C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCAGAAAAAGA--
TACTGGAAAAAAAA
 C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

ZNF384/MA1125.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGCAGAAAAAGA-
-TTTAAAAAAAAA
 C A G T C A T G A G T C C G T A A T C G G T C A C G T A G C T A G C T A C G T A T C A G C G T A A C G T
A C G T C G A T G C A T C G A T G T C A C G T A G C T A C G T A C G T A G C T A G C T A G C T A G C T A