Information for 15-TGCTTCTAAA (Motif 19)

G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A
Reverse Opposite:
G A C T G A C T A G C T C T G A T A C G G T C A G T C A C T A G A T G C C G T A
p-value:1e-12
log p-value:-2.846e+01
Information Content per bp:1.649
Number of Target Sequences with motif183.0
Percentage of Target Sequences with motif25.21%
Number of Background Sequences with motif7283.4
Percentage of Background Sequences with motif14.95%
Average Position of motif in Targets480.6 +/- 303.5bp
Average Position of motif in Background418.7 +/- 257.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGCTTCTAAA
-GCTTCC---
 G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

OSR2/MA1646.1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTCTAAA-
NNGCTTCTGTNN
 A C G T G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T
A G T C C A G T T C A G G A T C A G C T G C A T A T G C G A C T A T C G A C G T C A G T C A G T

HOXC13/MA0907.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCTTCTAAA--
-GCTCGTAAAAA
 G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T A C G T
A C G T A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

TATA-Box(TBP)/Promoter/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TGCTTCTAAA---
-CCTTTTATAGNC
 G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T A C G T A C G T
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGCTTCTAAA----
AAAGCTCGTAAAATTT
 A C G T A C G T G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T A C G T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PB0154.1_Osr1_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGCTTCTAAA---
ACATGCTACCTAATAC
 A C G T A C G T A C G T G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T A C G T A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PH0048.1_Hoxa13/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCTTCTAAA----
AAACCTCGTAAAATTT
 A C G T A C G T G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PRDM4/MA1647.1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCTTCTAAA
GTCTGTTTCTA--
 A C G T A C G T A C G T G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A
C T A G C A G T T A G C C G A T T C A G G C A T A G C T G C A T G T A C G C A T G C T A A C G T A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGCTTCTAAA--
--CYHATAAAAN
 G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T A C G T
A C G T A C G T T A G C G A T C G T A C C T G A G C A T C T G A C G T A T G C A C G T A G A T C

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TGCTTCTAAA---
ACTTGCTACCTACACC
 A C G T A C G T A C G T G A C T T A C G G A T C C A G T C A G T A T G C G A C T T C G A C T G A C T G A A C G T A C G T A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C