Information for 15-AGCTGCCTTTCT (Motif 24)

C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A C G T A C G T A A C T G A C T G A G T C C G T A A C T G A G T C A C G T
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.530
Number of Target Sequences with motif174.0
Percentage of Target Sequences with motif23.97%
Number of Background Sequences with motif7542.5
Percentage of Background Sequences with motif15.49%
Average Position of motif in Targets479.2 +/- 313.6bp
Average Position of motif in Background414.5 +/- 257.6bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.3/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGCTGCCTTTCT---
----TTCTTTCTCTT
 C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T G T A C C G A T G C A T C G A T G T A C C G A T G T A C G A C T G A C T

MYOG/MA0500.2/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCCTTTCT
CAGCAGCTGCTG----
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T A C G T A C G T A C G T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:3
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AGCTGCCTTTCT
SSRGCAGCTGCH-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
T A C G T A C G C T A G T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCTGCCTTTCT
NNCAGCTGNN-----
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
A T G C T A C G A T G C T C G A A T C G T A G C A G C T T C A G A T G C T A C G A C G T A C G T A C G T A C G T A C G T

ASCL1/MA1100.2/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGCTGCCTTTCT
NGCAGCTGCN-----
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCCTTTCT
AGCAGCTGCT-----
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AGCTGCCTTTCT
AGCAGCTGCTNN---
 A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCTGCCTTTCT
NNACAGCTGC------
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AGCTGCCTTTCT-
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C G T C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGCTGCCTTTCT
AGGVNCCTTTGT
 C G T A A C T G A G T C A C G T A C T G A G T C A G T C A C G T A C G T A C G T A G T C A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T