Information for 19-CAGCTGCGGGGT (Motif 27)

A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A G T C A C T G A G T C C G T A A C T G A G T C A C G T A C T G
p-value:1e-3
log p-value:-7.740e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets704.4 +/- 40.6bp
Average Position of motif in Background437.4 +/- 205.7bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGCGGGGT
CGCAGCTGCG----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

BHLHE22(var.2)/MA1635.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCGGGGT
CGCAGCTGCG----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
A T G C T A C G A G T C T C G A A T C G T A G C A G C T T A C G A T G C T A C G A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCGGGGT
NCAGCTGCTG---
 A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T

MYOG/MA0500.2/Jaspar

Match Rank:4
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGCGGGGT
NNGCAGCTGCNN---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
T A G C C T G A T C A G A G T C T C G A A C T G T G A C A G C T T C A G A G T C G A C T A T C G A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCGGGGT
NNACAGCTGC-----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCGGGGT
AACAGCTGCAG---
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T

ASCL1/MA1100.2/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGCGGGGT
NGCAGCTGCN----
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
T C A G T C A G G A T C G T C A A T C G T A G C C G A T C T A G A G T C A G T C A C G T A C G T A C G T A C G T

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:8
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGCGGGGT
DGCAGCTGCYSS--
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:9
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------CAGCTGCGGGGT
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCGGGGT
AGCAGCTGCTNN--
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G A G T C A C T G A C T G A C T G A C T G A C G T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T