Information for 4-TCTAAAAATAGG (Motif 10)


Reverse Opposite:

p-value:1e-17
log p-value:-3.945e+01
Information Content per bp:1.717
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif11.85%
Number of Background Sequences with motif2017.4
Percentage of Background Sequences with motif4.14%
Average Position of motif in Targets410.6 +/- 253.8bp
Average Position of motif in Background408.1 +/- 250.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0052.2_MEF2A/Jaspar

Match Rank:1
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-TCTAAAAATAGG--
AGCTAAAAATAGCAT

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:TCTAAAAATAGG
DCYAAAAATAGM

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:forward strand
Alignment:TCTAAAAATAGG
-CCAAAAATAG-

MA0497.1_MEF2C/Jaspar

Match Rank:4
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--TCTAAAAATAGG-
ATGCTAAAAATAGAA

MF0008.1_MADS_class/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TCTAAAAATAGG
-CCATATATGG-

MA0033.1_FOXL1/Jaspar

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TCTAAAAATAGG
--TATACATA--

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTAAAAATAGG----
-GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTAAAAATAGG----
-GTATAAAAGGCGGGG

PB0116.1_Elf3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCTAAAAATAGG---
GTTCAAAAAAAAAATTC

MA0077.1_SOX9/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCTAAAAATAGG
--GAACAATGG-