Information for 7-CANTCTGC (Motif 11)


Reverse Opposite:

p-value:1e-16
log p-value:-3.847e+01
Information Content per bp:1.817
Number of Target Sequences with motif380.0
Percentage of Target Sequences with motif52.34%
Number of Background Sequences with motif17972.3
Percentage of Background Sequences with motif36.91%
Average Position of motif in Targets454.5 +/- 279.2bp
Average Position of motif in Background410.5 +/- 260.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0461.1_Atoh1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CANTCTGC
GCCATCTG-

MA0117.1_Mafb/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CANTCTGC
NCGTCAGC

MA0060.2_NFYA/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CANTCTGC-----
TGGACCAATCAGCACTCT

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CANTCTGC-
GCCATCTGTT

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CANTCTGC-
RCCATMTGTT

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CANTCTGC----
TCNCCTGCTGNGNNN

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CANTCTGC
VBSYGTCTGG

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CANTCTGC-
TGAGTCAGCA

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CANTCTGC----
NNTCCTGCTGTGNNN

POL002.1_INR/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CANTCTGC
TCAGTCTT-