Information for 8-GGAGCTYKGC (Motif 12)


Reverse Opposite:

p-value:1e-15
log p-value:-3.657e+01
Information Content per bp:1.737
Number of Target Sequences with motif233.0
Percentage of Target Sequences with motif32.09%
Number of Background Sequences with motif9365.7
Percentage of Background Sequences with motif19.23%
Average Position of motif in Targets451.6 +/- 293.0bp
Average Position of motif in Background411.5 +/- 257.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTYKGC
CGGAGC-----

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCTYKGC---
NNNNTGAGCACTGTNNG

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTYKGC
GGGAGGACNG-

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAGCTYKGC
-CAGCC----

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTYKGC-
GGGGGCGGGGCC

MA0512.1_Rxra/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCTYKGC
NCTGACCTTTG-

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGAGCTYKGC-----
-NNGCNCTGCGCGGC

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTYKGC
CTGACCTTTG-

MA0017.1_NR2F1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GGAGCTYKGC----
TGACCTTTGAACCT

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GGAGCTYKGC
TGGGTGGGGC