| p-value: | 1e-15 |
| log p-value: | -3.524e+01 |
| Information Content per bp: | 1.655 |
| Number of Target Sequences with motif | 260.0 |
| Percentage of Target Sequences with motif | 35.81% |
| Number of Background Sequences with motif | 11003.2 |
| Percentage of Background Sequences with motif | 22.60% |
| Average Position of motif in Targets | 434.4 +/- 270.0bp |
| Average Position of motif in Background | 415.2 +/- 250.5bp |
| Strand Bias (log2 ratio + to - strand density) | 0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.35 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 1 |
| Score: | 0.86
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCATGGMAAC-
TTGCCATGGCAACN |
|
|
|
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
| Match Rank: | 2 |
| Score: | 0.84
| | Offset: | -3
| | Orientation: | reverse strand |
| Alignment: | ---CCATGGMAAC-
TTGCCATGGCAACC |
|
|
|
MA0509.1_Rfx1/Jaspar
| Match Rank: | 3 |
| Score: | 0.84
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CCATGGMAAC
GTTGCCATGGCAAC |
|
|
|
MA0600.1_RFX2/Jaspar
| Match Rank: | 4 |
| Score: | 0.82
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CCATGGMAAC-----
GTTGCCATGGCAACCGCGG |
|
|
|
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer
| Match Rank: | 5 |
| Score: | 0.80
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CCATGGMAAC
KGTTGCCATGGCAAC |
|
|
|
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer
| Match Rank: | 6 |
| Score: | 0.79
| | Offset: | -4
| | Orientation: | reverse strand |
| Alignment: | ----CCATGGMAAC--
GTTGCCATGGCAACCG |
|
|
|
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer
| Match Rank: | 7 |
| Score: | 0.76
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CCATGGMAAC--
SCCTAGCAACAG |
|
|
|
PB0055.1_Rfx4_1/Jaspar
| Match Rank: | 8 |
| Score: | 0.75
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CCATGGMAAC---
TACCATAGCAACGGT |
|
|
|
MA0510.1_RFX5/Jaspar
| Match Rank: | 9 |
| Score: | 0.74
| | Offset: | -2
| | Orientation: | forward strand |
| Alignment: | --CCATGGMAAC---
CTCCCTGGCAACAGC |
|
|
|
PB0054.1_Rfx3_1/Jaspar
| Match Rank: | 10 |
| Score: | 0.70
| | Offset: | -6
| | Orientation: | forward strand |
| Alignment: | ------CCATGGMAAC-------
TGTGACCCTTAGCAACCGATTAA |
|
|
|
