Information for 14-TGCTCHVAGC (Motif 20)


Reverse Opposite:

p-value:1e-12
log p-value:-2.874e+01
Information Content per bp:1.463
Number of Target Sequences with motif374.0
Percentage of Target Sequences with motif51.52%
Number of Background Sequences with motif18643.8
Percentage of Background Sequences with motif38.29%
Average Position of motif in Targets431.7 +/- 267.7bp
Average Position of motif in Background413.7 +/- 259.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.65
Offset:6
Orientation:forward strand
Alignment:TGCTCHVAGC-
------CAGCC

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TGCTCHVAGC
GGTGYTGACAGS

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGCTCHVAGC-
-VBTGWCAGCB

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCTCHVAGC
----CACAGN

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCTCHVAGC
-GCTCCG---

MA0498.1_Meis1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGCTCHVAGC-
NNNTGAGTGACAGCT

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCTCHVAGC
AAATCACTGC

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCTCHVAGC-----
GATATTGACAGCTGCGT

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGCTCHVAGC----
NNNAGATCAAAGGANNN

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TGCTCHVAGC----
NANAGATCAAAGGGNNN