Information for 15-GAAATGTGTT (Motif 21)


Reverse Opposite:

p-value:1e-12
log p-value:-2.808e+01
Information Content per bp:1.650
Number of Target Sequences with motif137.0
Percentage of Target Sequences with motif18.87%
Number of Background Sequences with motif4899.4
Percentage of Background Sequences with motif10.06%
Average Position of motif in Targets485.7 +/- 339.2bp
Average Position of motif in Background415.6 +/- 251.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0090.1_TEAD1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GAAATGTGTT
CNGAGGAATGTG--

MA0058.2_MAX/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GAAATGTGTT-
-CCATGTGCTT

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAAATGTGTT
CCWGGAATGY---

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAAATGTGTT
CCWGGAATGY---

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAAATGTGTT
NCTGGAATGC---

PB0117.1_Eomes_2/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAATGTGTT-----
GCGGAGGTGTCGCCTC

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GAAATGTGTT---
-NNHTGTGGTTWN

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAATGTGTT--
GWAAYHTGABMC

MA0133.1_BRCA1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GAAATGTGTT--
-----GTGTTGN

PB0141.1_Isgf3g_2/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GAAATGTGTT--
NNGTANTGTTTTNC