Information for 16-CAGTATGWGGSG (Motif 26)


Reverse Opposite:

p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets459.8 +/- 187.8bp
Average Position of motif in Background609.1 +/- 208.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGTATGWGGSG
ACAGGATGTGGT-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGTATGWGGSG--
--NNHTGTGGTTWN

PB0202.1_Zfp410_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTATGWGGSG------
-NNTNNGGGGCGGNGNGN

PB0025.1_Glis2_1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAGTATGWGGSG------
--NTNTGGGGGGTCNNNA

MA0002.2_RUNX1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGTATGWGGSG-
--GTCTGTGGTTT

MA0139.1_CTCF/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CAGTATGWGGSG---
TGGCCACCAGGGGGCGCTA

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGTATGWGGSG-----
--ATTTTNGGGGGGCNN

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGTATGWGGSG
TNCCATATATGG--

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGTATGWGGSG
CCATATATGG--

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CAGTATGWGGSG------
GCCASCAGGGGGCGCYVNNG