Information for 20-AATGAGTSTT (Motif 29)


Reverse Opposite:

p-value:1e-5
log p-value:-1.344e+01
Information Content per bp:1.873
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif5.65%
Number of Background Sequences with motif1203.2
Percentage of Background Sequences with motif2.47%
Average Position of motif in Targets435.6 +/- 370.1bp
Average Position of motif in Background398.7 +/- 254.3bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----AATGAGTSTT---
NTNNNAGGAGTCTCNTN

PH0152.1_Pou6f1_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------AATGAGTSTT-
AAACATAATGAGGTTGC

MA0462.1_BATF::JUN/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AATGAGTSTT
GAAATGACTCA-

MA0491.1_JUND/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATGAGTSTT-
GGTGACTCATC

PH0151.1_Pou6f1_1/Jaspar

Match Rank:5
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AATGAGTSTT-
GACGATAATGAGCTTGC

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AATGAGTSTT--
DATGASTCATHN

BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AATGAGTSTT
DATGASTCAT

MA0478.1_FOSL2/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATGAGTSTT--
-NTGAGTCATCN

MA0490.1_JUNB/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATGAGTSTT--
-ATGAGTCATCN

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AATGAGTSTT-----
-ATGAGTCATNTNNT