Information for 21-TCTCACCCCGCA (Motif 31)


Reverse Opposite:

p-value:1e-1
log p-value:-4.213e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets704.8 +/- 44.8bp
Average Position of motif in Background580.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0595.1_SREBF1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCTCACCCCGCA
-ATCACCCCAC-

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCTCACCCCGCA
CNGTCACGCCAC-

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTCACCCCGCA
-ATCACCCCAT-

PB0100.1_Zfp740_1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCTCACCCCGCA----
CCCCCCCCCCCACTTG

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCTCACCCCGCA-----
-CTATCCCCGCCCTATT

MA0596.1_SREBF2/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCTCACCCCGCA
-ATCACCCCAT-

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCTCACCCCGCA-----
-TCGTACCCGCATCATT

PB0025.1_Glis2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TCTCACCCCGCA---
TATCGACCCCCCACAG

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCTCACCCCGCA--
TGTCGTGACCCCTTAAT

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCTCACCCCGCA--
ATCCCCGCCCCTAAAA