Information for 25-CATAGGAAGT (Motif 34)


Reverse Opposite:

p-value:1e-1
log p-value:-2.862e+00
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif96.1
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets243.5 +/- 166.5bp
Average Position of motif in Background402.4 +/- 251.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CATAGGAAGT
AACAGGAAGT

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.79
Offset:1
Orientation:forward strand
Alignment:CATAGGAAGT-
-AGAGGAAGTG

MA0474.1_Erg/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CATAGGAAGT--
-ACAGGAAGTGG

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CATAGGAAGT-
-ACAGGAAGTG

MA0098.2_Ets1/Jaspar

Match Rank:5
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CATAGGAAGT---
NNNACAGGAAGTGGN

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:6
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CATAGGAAGT-
-ACAGGAAGTG

MA0475.1_FLI1/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CATAGGAAGT--
-ACAGGAAGTGG

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CATAGGAAGT----
AAGATCGGAANTNNNA

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:CATAGGAAGT
--CAGGAAGG

MA0156.1_FEV/Jaspar

Match Rank:10
Score:0.72
Offset:2
Orientation:forward strand
Alignment:CATAGGAAGT
--CAGGAAAT