Information for 24-GCACACGGCCCC (Motif 35)


Reverse Opposite:

p-value:1e-1
log p-value:-2.849e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.14%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets715.3 +/- 51.6bp
Average Position of motif in Background430.1 +/- 152.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)6.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GCACACGGCCCC
NNTTTGCACACGGCCC-

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCACACGGCCCC-----
TCACCCCGCCCCAAATT

PB0076.1_Sp4_1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCACACGGCCCC-----
GGTCCCGCCCCCTTCTC

MA0058.2_MAX/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCACACGGCCCC
AAGCACATGG----

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCACACGGCCCC
AGCGGCACACACGCAA

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCACACGGCCCC
AAGCACATGG----

PB0110.1_Bcl6b_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCACACGGCCCC-----
-ATCCCCGCCCCTAAAA

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCACACGGCCCC
CCAGACRSVB--

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCACACGGCCCC
NNAGGGACAAGGGCNC

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCACACGGCCCC-
-GGCCCCGCCCCC