| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-13 | -3.098e+01 | 0.0000 | 88.0 | 30.14% | 6448.6 | 13.19% | motif file (matrix) |
svg |
| 2 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-12 | -2.985e+01 | 0.0000 | 109.0 | 37.33% | 9201.7 | 18.82% | motif file (matrix) |
svg |
| 3 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-11 | -2.555e+01 | 0.0000 | 144.0 | 49.32% | 14802.6 | 30.27% | motif file (matrix) |
svg |
| 4 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-10 | -2.442e+01 | 0.0000 | 134.0 | 45.89% | 13528.1 | 27.67% | motif file (matrix) |
svg |
| 5 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-10 | -2.408e+01 | 0.0000 | 85.0 | 29.11% | 6928.7 | 14.17% | motif file (matrix) |
svg |
| 6 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-9 | -2.160e+01 | 0.0000 | 88.0 | 30.14% | 7661.0 | 15.67% | motif file (matrix) |
svg |
| 7 |
| Sox7(HMG)/ESC-Sox7-ChIP-Seq(GSE133899)/Homer | 1e-8 | -2.016e+01 | 0.0000 | 42.0 | 14.38% | 2493.7 | 5.10% | motif file (matrix) |
svg |
| 8 |
| Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer | 1e-8 | -1.852e+01 | 0.0000 | 138.0 | 47.26% | 15306.5 | 31.30% | motif file (matrix) |
svg |
| 9 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-7 | -1.749e+01 | 0.0000 | 75.0 | 25.68% | 6626.4 | 13.55% | motif file (matrix) |
svg |
| 10 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-7 | -1.733e+01 | 0.0000 | 128.0 | 43.84% | 14057.6 | 28.75% | motif file (matrix) |
svg |
| 11 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.165e+01 | 0.0003 | 64.0 | 21.92% | 6212.5 | 12.71% | motif file (matrix) |
svg |
| 12 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-4 | -9.294e+00 | 0.0034 | 44.0 | 15.07% | 4057.5 | 8.30% | motif file (matrix) |
svg |
| 13 |
| CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer | 1e-4 | -9.256e+00 | 0.0034 | 33.0 | 11.30% | 2710.9 | 5.54% | motif file (matrix) |
svg |
| 14 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-3 | -8.939e+00 | 0.0041 | 20.0 | 6.85% | 1298.7 | 2.66% | motif file (matrix) |
svg |
| 15 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-3 | -8.192e+00 | 0.0081 | 62.0 | 21.23% | 6698.4 | 13.70% | motif file (matrix) |
svg |
| 16 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.978e+00 | 0.0094 | 43.0 | 14.73% | 4178.1 | 8.54% | motif file (matrix) |
svg |
| 17 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-3 | -7.964e+00 | 0.0094 | 76.0 | 26.03% | 8751.8 | 17.90% | motif file (matrix) |
svg |
| 18 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-3 | -7.895e+00 | 0.0094 | 35.0 | 11.99% | 3171.1 | 6.49% | motif file (matrix) |
svg |
| 19 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-3 | -7.707e+00 | 0.0104 | 39.0 | 13.36% | 3713.1 | 7.59% | motif file (matrix) |
svg |
| 20 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-3 | -7.701e+00 | 0.0104 | 83.0 | 28.42% | 9854.3 | 20.15% | motif file (matrix) |
svg |
| 21 |
| PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer | 1e-3 | -7.227e+00 | 0.0152 | 42.0 | 14.38% | 4202.4 | 8.59% | motif file (matrix) |
svg |
| 22 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-3 | -7.077e+00 | 0.0169 | 82.0 | 28.08% | 9902.8 | 20.25% | motif file (matrix) |
svg |
| 23 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-2 | -6.603e+00 | 0.0259 | 109.0 | 37.33% | 14191.4 | 29.02% | motif file (matrix) |
svg |
| 24 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-2 | -5.984e+00 | 0.0462 | 31.0 | 10.62% | 3021.9 | 6.18% | motif file (matrix) |
svg |
| 25 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -5.976e+00 | 0.0462 | 45.0 | 15.41% | 4902.3 | 10.03% | motif file (matrix) |
svg |
| 26 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.886e+00 | 0.0470 | 67.0 | 22.95% | 8074.8 | 16.51% | motif file (matrix) |
svg |
| 27 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -5.846e+00 | 0.0471 | 6.0 | 2.05% | 231.4 | 0.47% | motif file (matrix) |
svg |
| 28 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.697e+00 | 0.0527 | 57.0 | 19.52% | 6678.5 | 13.66% | motif file (matrix) |
svg |
| 29 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-2 | -5.619e+00 | 0.0551 | 94.0 | 32.19% | 12249.8 | 25.05% | motif file (matrix) |
svg |
| 30 |
| WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer | 1e-2 | -4.862e+00 | 0.1135 | 30.0 | 10.27% | 3134.3 | 6.41% | motif file (matrix) |
svg |
| 31 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-2 | -4.839e+00 | 0.1135 | 34.0 | 11.64% | 3682.9 | 7.53% | motif file (matrix) |
svg |
| 32 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-2 | -4.700e+00 | 0.1251 | 29.0 | 9.93% | 3038.2 | 6.21% | motif file (matrix) |
svg |