Information for 7-AGGCGGATCTCT (Motif 10)


Reverse Opposite:

p-value:1e-44
log p-value:-1.029e+02
Information Content per bp:1.620
Number of Target Sequences with motif516.0
Percentage of Target Sequences with motif18.87%
Number of Background Sequences with motif4497.1
Percentage of Background Sequences with motif9.92%
Average Position of motif in Targets90.4 +/- 88.2bp
Average Position of motif in Background94.4 +/- 57.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGATCTCT
CAAAGGCGTGGCCAG

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGCGGATCTCT-----
NNNCTGATATCTCNNNN

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGGCGGATCTCT
AGGGGGCGGGGCTG-

MA0057.1_MZF1_5-13/Jaspar

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGATCTCT
GGAGGGGGAA----

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------AGGCGGATCTCT
GGGNGGGGGCGGGGC---

PB0143.1_Klf7_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGGATCTCT
NNNTNGGGCGTATNNTN

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGGCGGATCTCT
ANCAGGATGT--

POL005.1_DPE/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AGGCGGATCTCT
--GAAGATGTT-

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGGCGGATCTCT
NNCAGGTGNN-----

PB0025.1_Glis2_1/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---AGGCGGATCTCT-
NTNTGGGGGGTCNNNA