Information for 12-GCGTCAGATC (Motif 16)


Reverse Opposite:

p-value:1e-30
log p-value:-7.016e+01
Information Content per bp:1.817
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif3.73%
Number of Background Sequences with motif416.3
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets95.0 +/- 68.2bp
Average Position of motif in Background86.7 +/- 57.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCGTCAGATC--
--AACAGATGGC

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCGTCAGATC------
AAGGCCAGATGGTCCGG

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCGTCAGATC
-CAGCTGNT-

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GCGTCAGATC--
GGNGCGNCTGTTNNN

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GCGTCAGATC-
-BRRCVGTTDN

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GCGTCAGATC---
-----AGATAASR

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCGTCAGATC-----
CGCGCCGGGTCACGTA

PH0016.1_Cux1_1/Jaspar

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GCGTCAGATC------
ACCGGTTGATCACCTGA

MA0024.2_E2F1/Jaspar

Match Rank:9
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GCGTCAGATC
CGGGCGGGAGG--

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GCGTCAGATC
ATGCCAGACN