Information for 13-TGCTCTTCCAGA (Motif 18)


Reverse Opposite:

p-value:1e-28
log p-value:-6.573e+01
Information Content per bp:1.711
Number of Target Sequences with motif156.0
Percentage of Target Sequences with motif5.71%
Number of Background Sequences with motif919.1
Percentage of Background Sequences with motif2.03%
Average Position of motif in Targets92.6 +/- 63.5bp
Average Position of motif in Background96.9 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0152.1_NFATC2/Jaspar

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TGCTCTTCCAGA
---TTTTCCA--

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TGCTCTTCCAGA--
----ATGCCAGACN

MA0062.2_GABPA/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TGCTCTTCCAGA
NCCACTTCCGG-

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGCTCTTCCAGA--
TTTTTTTTTTTTTTCAGGTT

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------TGCTCTTCCAGA--
TTTTTTTTTTTTTTCAGGTT

MA0473.1_ELF1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCTCTTCCAGA---
--CACTTCCTGNTTC

MA0076.2_ELK4/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TGCTCTTCCAGA
-CCACTTCCGGC

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCTCTTCCAGA
GTTTCACTTCCG--

MF0001.1_ETS_class/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGCTCTTCCAGA
----CTTCCGGT

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TGCTCTTCCAGA
---GCTTCC---