Information for 13-GTGTAGTATC (Motif 20)


Reverse Opposite:

p-value:1e-25
log p-value:-5.914e+01
Information Content per bp:1.967
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.9 +/- 31.7bp
Average Position of motif in Background118.5 +/- 23.8bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0036.1_Irf6_1/Jaspar

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTGTAGTATC------
NNNTTGGTTTCGNTNNN

MA0032.1_FOXC1/Jaspar

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGTAGTATC
GGTAAGTA-----

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGTAGTATC
NNTGTGGATTSS-

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GTGTAGTATC
NNHTGTGGTTWN

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GTGTAGTATC------
-TNTGGTTTCGATACN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTGTAGTATC---
---TGGTTTCAGT

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTGTAGTATC----
ADGGYAGYAGCATCT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GTGTAGTATC-
---YSTTATCT

PH0161.1_Six1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTGTAGTATC------
GATGGGGTATCATTTTT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GTGTAGTATC
CTGTGGTTTN