Information for 15-GGGCGTGG (Motif 22)


Reverse Opposite:

p-value:1e-23
log p-value:-5.510e+01
Information Content per bp:1.905
Number of Target Sequences with motif256.0
Percentage of Target Sequences with motif9.36%
Number of Background Sequences with motif2130.7
Percentage of Background Sequences with motif4.70%
Average Position of motif in Targets133.1 +/- 145.6bp
Average Position of motif in Background94.6 +/- 61.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0039.2_Klf4/Jaspar

Match Rank:1
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGCGTGG-
TGGGTGGGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-GGGCGTGG-
DGGGYGKGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:3
Score:0.89
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGTGG----
NNAGGGGCGGGGTNNA

MA0493.1_Klf1/Jaspar

Match Rank:4
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGTGG--
TGGGTGTGGCN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGTGG-
TGGGTGTGGC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--GGGCGTGG--
NTGGGTGTGGCC

MA0599.1_KLF5/Jaspar

Match Rank:7
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GGGCGTGG-
GGGGNGGGGC

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GGGCGTGG----
CAAAGGCGTGGCCAG

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGGCGTGG---
AGGGGGCGGGGCTG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:10
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GGGCGTGG
-TGCGTG-