Information for 18-TAGGTGTTGGTA (Motif 24)


Reverse Opposite:

p-value:1e-21
log p-value:-5.018e+01
Information Content per bp:1.942
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets106.1 +/- 15.5bp
Average Position of motif in Background88.3 +/- 38.9bp
Strand Bias (log2 ratio + to - strand density)3.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TAGGTGTTGGTA-
GCGGAGGTGTCGCCTC

MA0133.1_BRCA1/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TAGGTGTTGGTA
---GTGTTGN--

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAGGTGTTGGTA
-AGGTGTCA---

MA0009.1_T/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TAGGTGTTGGTA
CTAGGTGTGAA--

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGGTGTTGGTA--
--GGTGYTGACAGS

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TAGGTGTTGGTA
--NATGTTGCAA

MA0161.1_NFIC/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TAGGTGTTGGTA
------TTGGCA

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TAGGTGTTGGTA
-AGGTGTTAAT-

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTGTTGGTA
NNCAGGTGNN----

PB0054.1_Rfx3_1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TAGGTGTTGGTA---------
NTNNNNNGTTGCTANGGNNCANA