Information for 17-TCCACGCATC (Motif 26)


Reverse Opposite:

p-value:1e-18
log p-value:-4.325e+01
Information Content per bp:1.530
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets134.4 +/- 31.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:TCCACGCATC
--CACGCA--

MA0130.1_ZNF354C/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TCCACGCATC
ATCCAC-----

MA0069.1_Pax6/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCCACGCATC----
TTCACGCATGAGTT

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCCACGCATC
TBGCACGCAA-

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TCCACGCATC
CRCCCACGCA--

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCCACGCATC---
TCGTACCCGCATCATT

PH0134.1_Pbx1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCCACGCATC--------
-TCACCCATCAATAAACA

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCCACGCATC--
GTGCCACGCGACTG

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TCCACGCATC
-GCACGTNC-

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TCCACGCATC
-GCACGTAY-