Information for 22-GCTAAGATCAAG (Motif 27)


Reverse Opposite:

p-value:1e-17
log p-value:-4.089e+01
Information Content per bp:1.530
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.4 +/- 39.1bp
Average Position of motif in Background26.5 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)3.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0160.1_NR4A2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTAAGATCAAG
---AAGGTCAC-

PB0125.1_Gata3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GCTAAGATCAAG----
NNNNNCGATANNATCTNNNNAN

MA0512.1_Rxra/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTAAGATCAAG
-CAAAGGTCAGA

MA0029.1_Mecom/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTAAGATCAAG
AAGATAAGATAACA

PB0040.1_Lef1_1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GCTAAGATCAAG------
-NANAGATCAAAGGGNNN

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTAAGATCAAG
-CAAAGGTCAG-

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GCTAAGATCAAG----
----AGGTCAAGGTCA

MA0017.1_NR2F1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----GCTAAGATCAAG
AGGTTCAAAGGTCA--

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCTAAGATCAAG------
-NNNAGATCAAAGGANNN

MA0141.2_Esrrb/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTAAGATCAAG
AGCTCAAGGTCA--