Information for 23-ATAGGAGCTT (Motif 32)


Reverse Opposite:

p-value:1e-13
log p-value:-3.074e+01
Information Content per bp:1.530
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets113.0 +/- 24.6bp
Average Position of motif in Background124.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)3.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ATAGGAGCTT
--CGGAGC--

PB0181.1_Spdef_2/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATAGGAGCTT---
CTACTAGGATGTNNTN

MA0164.1_Nr2e3/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:ATAGGAGCTT-
----AAGCTTG

PB0115.1_Ehf_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---ATAGGAGCTT---
AAGATCGGAANTNNNA

PB0128.1_Gcm1_2/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATAGGAGCTT--
TGCGCATAGGGGAGGAG

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---ATAGGAGCTT--
ADGGYAGYAGCATCT

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ATAGGAGCTT
----CAGCC-

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ATAGGAGCTT--
ATGTACAGTAGCAAAG

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-ATAGGAGCTT
AACAGGAAGT-

PB0050.1_Osr1_1/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----ATAGGAGCTT--
ATTTACAGTAGCAAAA