Information for 25-WAMTTTTGGT (Motif 36)


Reverse Opposite:

p-value:1e-9
log p-value:-2.072e+01
Information Content per bp:1.779
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif35.2
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets116.8 +/- 64.8bp
Average Position of motif in Background88.4 +/- 52.6bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0020.1_Gabpa_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---WAMTTTTGGT----
NNNNACTTCCGGTATNN

ETS(ETS)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WAMTTTTGGT-
-ACTTCCGGTT

PB0032.1_IRC900814_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--WAMTTTTGGT----
GNNATTTGTCGTAANN

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-WAMTTTTGGT----
NTGGTTTCGGTTNNN

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:WAMTTTTGGT---
-RSTTTCRSTTTC

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--WAMTTTTGGT
KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---WAMTTTTGGT--
TTCTATTTTTAGNNN

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:WAMTTTTGGT---
-ACTTTCGTTTCT

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-WAMTTTTGGT
CTATTTTTGG-

MA0052.2_MEF2A/Jaspar

Match Rank:10
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----WAMTTTTGGT-
NNGCTATTTTTAGCN