Information for 4-GTGGTGGCDCAC (Motif 4)


Reverse Opposite:

p-value:1e-88
log p-value:-2.047e+02
Information Content per bp:1.612
Number of Target Sequences with motif567.0
Percentage of Target Sequences with motif20.74%
Number of Background Sequences with motif3783.1
Percentage of Background Sequences with motif8.35%
Average Position of motif in Targets83.0 +/- 67.3bp
Average Position of motif in Background94.8 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0142.1_Jundm2_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GTGGTGGCDCAC---
ATTGATGAGTCACCAA

MA0478.1_FOSL2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTGGTGGCDCAC
-GGATGACTCAT

MA0477.1_FOSL1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GTGGTGGCDCAC-
--GGTGACTCATG

MA0490.1_JUNB/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GTGGTGGCDCAC
-GGATGACTCAT

MA0130.1_ZNF354C/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GTGGTGGCDCAC
---GTGGAT---

MA0491.1_JUND/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GTGGTGGCDCAC-
--GGTGACTCATC

MA0489.1_JUN_(var.2)/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTGGTGGCDCAC
AGGAGATGACTCAT

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTGGTGGCDCAC-
-NNVTGASTCATN

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTGGTGGCDCAC
-TGCTGAGTCA-

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTGGTGGCDCAC--
--NATGACTCATNN