Information for 5-CTAYRTAGHB (Motif 7)


Reverse Opposite:

p-value:1e-66
log p-value:-1.543e+02
Information Content per bp:1.534
Number of Target Sequences with motif867.0
Percentage of Target Sequences with motif31.71%
Number of Background Sequences with motif8131.3
Percentage of Background Sequences with motif17.94%
Average Position of motif in Targets82.9 +/- 79.3bp
Average Position of motif in Background94.3 +/- 61.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0033.1_FOXL1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTAYRTAGHB
-TATGTNTA-

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTAYRTAGHB-----
GTATAAAAGGCGGGG

MA0108.2_TBP/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTAYRTAGHB-----
GTATAAAAGGCGGGG

MA0025.1_NFIL3/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CTAYRTAGHB-
TTATGTAACAT

PH0034.1_Gbx2/Jaspar

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTAYRTAGHB---
AGCGCTAATTAGCGATT

MA0147.2_Myc/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTAYRTAGHB
CCATGTGCTT

TATA-Box(TBP)/Promoter/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTAYRTAGHB
GNCTATAAAAGG

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTAYRTAGHB-
ACTTGCTACCTACACC

PB0154.1_Osr1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTAYRTAGHB-
ACATGCTACCTAATAC

PB0163.1_Six6_2/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---CTAYRTAGHB----
ATGGGATATATCCGCCT