[
  {
    "type": "methylC",
    "name": "H9-primed",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/H9-primed_onC.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/H9-primed_onC.methylC.gz.tbi",
    "options": { "isCombineStrands": true },
    "metadata": { "dataType": "methylC", "cellType": "Primed", "cellLine": "H9", "platform": "WGBS" }
  },
  {
    "type": "bigwig",
    "name": "H9-primed",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/step2.4_trimed_ATTACTCG-TATAGCCT_S2_L004_R1_001_bismark_bt2.deduplicated.Q10.sorted.bw",
    "metadata": { "dataType": "coverage", "cellType": "Primed", "cellLine": "H9", "platform": "WGBS" }
  },

  {
    "type": "methylC",
    "name": "Primed W3MECP2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/Primed_W3MECP2_aln.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/Primed_W3MECP2_aln.methylC.gz.tbi",
    "options": { "isCombineStrands": true, "colorsForContext": { "CG" : { "color" : "#006400", "background": "#d9d9d9" } } },
    "metadata": { "dataType": "methylC", "cellType": "Primed", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "Primed W3MECP2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/Primed_W3MECP2_aln.sorted.bw",
    "options": { "color": "#006400" },
    "metadata": { "dataType": "coverage", "cellType": "Primed", "cellLine": "W3MECP2", "platform": "ONT" }
  },

  {
    "type": "methylC",
    "name": "AN-naive",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/AN-Naive_onC.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/AN-Naive_onC.methylC.gz.tbi",
    "options": { "isCombineStrands": true, "color": "#377EB8" },
    "metadata": { "dataType": "methylC", "cellType": "Naive", "cellLine": "AN", "platform": "WGBS" }
  },
  {
    "type": "bigwig",
    "name": "AN-naive",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/step2.4_trimed_CTGAAGCT-CAGGACGT_S30_L004_R1_001_bismark_bt2.deduplicated.Q10.sorted.bw",
    "options": { "backgroundColor" : "#EBE49E" },
    "metadata": { "dataType": "coverage", "cellType": "Naive", "cellLine": "AN", "platform": "WGBS" }
  },

  {
    "type": "methylC",
    "name": "H9-naive",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/H9-Naive_onC.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/H9-Naive_onC.methylC.gz.tbi",
    "options": { "isCombineStrands": true, "color": "#377EB8" },
    "metadata": { "dataType": "methylC", "cellType": "Naive", "cellLine": "H9", "platform": "WGBS" }
  },
  {
    "type": "bigwig",
    "name": "H9-naive",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/step2.4_trimed_GAATTCGT-TAATCTTA_S33_L004_R1_001_bismark_bt2.deduplicated.Q10.sorted.bw",
    "options": { "backgroundColor" : "#EBE49E" },
    "metadata": { "dataType": "coverage", "cellType": "Naive", "cellLine": "H9", "platform": "WGBS" }
  },

  {
    "type": "methylC",
    "name": "Naive W3MECP2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/091724_Naive_W3MECPC2_aln.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/091724_Naive_W3MECPC2_aln.methylC.gz.tbi",
    "options": { "isCombineStrands": true, "colorsForContext": { "CG" : { "color" : "#006400", "background": "#d9d9d9" } } },
    "metadata": { "dataType": "methylC", "cellType": "Naive", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "Naive W3MECP2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/091724_Naive_W3MECPC2_aln.sorted.bw",
    "options": { "backgroundColor" : "#EBE49E" , "color" : "#006400" },
    "metadata": { "dataType": "coverage", "cellType": "Naive", "cellLine": "W3MECP2", "platform": "ONT" }
  },

  {
    "type": "methylC",
    "name": "AN-naive-TSC",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/AN-TSC_onC.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/AN-TSC_onC.methylC.gz.tbi",
    "options": { "isCombineStrands": true, "color": "#377EB8" },
    "metadata": { "dataType": "methylC", "cellType": "TSC", "cellLine": "AN", "platform": "WGBS" }
  },
  {
    "type": "bigwig",
    "name": "AN naive TSC",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/step2.4_trimed_ATTCAGAA-AGGCGAAG_S3_L004_R1_001_bismark_bt2.deduplicated.Q10.sorted.bw",
    "metadata": { "dataType": "coverage", "cellType": "TSC", "cellLine": "AN", "platform": "WGBS" }
  },

  {
    "type": "methylC",
    "name": "H9-naive-TSC",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/H9-TSC_onC.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/H9-TSC_onC.methylC.gz.tbi",
    "options": { "isCombineStrands": true, "color": "#377EB8" },
    "metadata": { "dataType": "methylC", "cellType": "TSC", "cellLine": "H9", "platform": "WGBS" }
  },
  {
    "type": "bigwig",
    "name": "H9 naive TSC",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/step2.4_trimed_GAGATTCC-GGCTCTGA_S5_L004_R1_001_bismark_bt2.deduplicated.Q10.sorted.bw",
    "metadata": { "dataType": "coverage", "cellType": "TSC", "cellLine": "H9", "platform": "WGBS" }
  },

  {
    "type": "methylC",
    "name": "TSC W3MECP2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/TSC_GFP_W3MECP2_merged_aln.methylC.gz",
    "indexUrl": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/TSC_GFP_W3MECP2_merged_aln.methylC.gz.tbi",
    "options": { "isCombineStrands": true, "colorsForContext": { "CG" : { "color" : "#006400", "background": "#d9d9d9" } } },
    "metadata": { "dataType": "methylC", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "TSC W3MECP2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/TSC_GFP_W3MECP2_merged_aln.sorted.bw",
    "options": { "color": "#006400" },
    "metadata": { "dataType": "coverage", "cellType": "none", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "ONT TSC vs Primed delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/dmr_TSC_GFP_vs_prime_min5CpG.filtered_delta.bw",
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "DSS TSC vs Primed delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/DSS_TSC_vs_Primed.bw",
    "options": { "backgroundColor" : "#CBF2A1" },
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "AN/H9", "platform": "WGBS" } 
  },
  {
    "type": "bigwig",
    "name": "Metilene TSC vs Primed delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/Metilene_tsc_vs_primed.bw",
    "options": { "backgroundColor" : "#C5C9CF" },
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "AN/H9", "platform": "WGBS" } 
  },
  {
    "type": "bigwig",
    "name": "ONT TSC vs Naive delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/dmr_TSC_GFP_vs_naive_min5CpG.filtered_delta.bw",
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "DSS TSC vs Naive delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/DSS_TSC_vs_Naive.bw",
    "options": { "backgroundColor" : "#CBF2A1" },
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "AN/H9", "platform": "WGBS" }
  },
  {
    "type": "bigwig",
    "name": "Metilene TSC vs Naive delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/Metilene_naive_vs_tsc.bw",
    "options": { "backgroundColor" : "#C5C9CF" },
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "AN/H9", "platform": "WGBS" }
  },
  {
    "type": "bigwig",
    "name": "ONT Naive vs Primed delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/dmr_naive_vs_prime_min5CpG.filtered_delta.bw",
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "W3MECP2", "platform": "ONT" } 
  },
  {
    "type": "bigwig",
    "name": "DSS Naive vs Primed delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/DSS_Naive_vs_Primed.bw",
    "options": { "backgroundColor" : "#CBF2A1" },
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "AN/H9", "platform": "WGBS" } 
  },
  {
    "type": "bigwig",
    "name": "Metilene Naive vs Primed delta meth",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/Metilene_naive_vs_primed.bw",
    "options": { "backgroundColor" : "#C5C9CF" },
    "metadata": { "dataType": "deltameth", "cellType": "none", "cellLine": "AN/H9", "platform": "WGBS" } 
  },
  {
    "type": "bedgraph",
    "name": "Primed W3 5hmC",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/5hmC/Primed_W3MECP2_aln.5hmC.cov30.bg.gz",
    "options": { "color": "cyan" },
    "metadata": { "dataType": "5hmC", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Naive W3 5hmC",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/5hmC/091724_Naive_W3MECPC2_aln.5hmC.cov30.bg.gz",
    "options": { "color": "cyan" },
    "metadata": { "dataType": "5hmC", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "TSC W3 5hmC",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/5hmC/TSC_GFP_W3MECP2_merged_aln.5hmC.cov30.bg.gz",
    "options": { "color": "cyan" },
    "metadata": { "dataType": "5hmC", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "Prime h1 methylation",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/prime_h1_meth.bw",
    "options": { "color": "#E41A1C", "yScale": { "min": 0, "max": 1 } },
    "metadata": { "dataType": "allele_methylation", "haplotype": "h1", "state": "Prime" }
  },
  {
    "type": "bigwig",
    "name": "Prime h2 methylation",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/prime_h2_meth.bw",
    "options": { "color": "#377EB8", "yScale": { "min": 0, "max": 1 } },
    "metadata": { "dataType": "allele_methylation", "haplotype": "h2", "state": "Prime" }
  },
  {
    "type": "bigwig",
    "name": "Naive h1 methylation",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/naive_h1_meth.bw",
    "options": { "backgroundColor": "#EBE49E", "color": "#E41A1C", "yScale": { "min": 0, "max": 1 } },
    "metadata": { "dataType": "allele_methylation", "cellType": "Naive", "haplotype": "h1", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "Naive h2 methylation",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/naive_h2_meth.bw",
    "options": { "backgroundColor": "#EBE49E", "color": "#377EB8", "yScale": { "min": 0, "max": 1 } },
    "metadata": { "dataType": "allele_methylation", "cellType": "Naive", "haplotype": "h2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "Naive h1 coverage",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/naive_h1_cov.bw",
    "options": { "backgroundColor": "#EBE49E", "color": "#E41A1C" },
    "metadata": { "dataType": "coverage", "cellType": "Naive", "haplotype": "h1", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "Naive h2 coverage",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/naive_h2_cov.bw",
    "options": { "backgroundColor": "#EBE49E", "color": "#377EB8" },
    "metadata": { "dataType": "coverage", "cellType": "Naive", "haplotype": "h2", "platform": "ONT" }
  },

  {
    "type": "bigwig",
    "name": "TSC h1 methylation",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/TSC_h1_meth.bw",
    "options": { "color": "#E41A1C", "yScale": { "min": 0, "max": 1 } },
    "metadata": { "dataType": "allele_methylation", "cellType": "TSC", "haplotype": "h1", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "TSC h2 methylation",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/TSC_h2_meth.bw",
    "options": { "color": "#377EB8", "yScale": { "min": 0, "max": 1 } },
    "metadata": { "dataType": "allele_methylation", "cellType": "TSC", "haplotype": "h2", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "TSC h1 coverage",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/TSC_h1_cov.bw",
    "options": { "color": "#E41A1C" },
    "metadata": { "dataType": "coverage", "cellType": "TSC", "haplotype": "h1", "platform": "ONT" }
  },
  {
    "type": "bigwig",
    "name": "TSC h2 coverage",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/TSC_h2_cov.bw",
    "options": { "color": "#377EB8" },
    "metadata": { "dataType": "coverage", "cellType": "TSC", "haplotype": "h2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Primed W3 RNA-seq Rep 1",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/RNAseq/step2.1_Star_Primed_Rep1_R1.Unique.stranded.bg.gz",
    "options": { "color": "orange" },
    "metadata": { "dataType": "RNA_seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Primed W3 RNA-seq Rep 2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/RNAseq/step2.1_Star_Primed_Rep2_R1.Unique.stranded.bg.gz",
    "options": { "color": "orange" },
    "metadata": { "dataType": "RNA_seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Naive W3 RNA-seq Rep 1",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/RNAseq/step2.1_Star_Naive_Rep1_R1.Unique.stranded.bg.gz",
    "options": { "color": "orange" },
    "metadata": { "dataType": "RNA_seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Naive W3 RNA-seq Rep 2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/RNAseq/step2.1_Star_Naive_Rep2_R1.Unique.stranded.bg.gz",
    "options": { "color": "orange" },
    "metadata": { "dataType": "RNA_seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "TSC W3 RNA-seq Rep 1",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/RNAseq/step2.1_Star_GFP_TSC_Rep1_R1.Unique.stranded.bg.gz",
    "options": { "color": "orange" },
    "metadata": { "dataType": "RNA_seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "TSC W3 RNA-seq Rep 2",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/RNAseq/step2.1_Star_GFP_TSC_Rep2_R1.Unique.stranded.bg.gz",
    "options": { "color": "orange" },
    "metadata": { "dataType": "RNA_seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Primed H3K27me3",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/ChIPseq/SRR1035435_primed_H3K27me3.bg.gz",
    "options": { "color": "brown" },
    "metadata": { "dataType": "ChIP-seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Naive H3K27me3",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/ChIPseq/SRR1035429_naive_H3K27me3.bg.gz",
    "options": { "color": "brown" },
    "metadata": { "dataType": "ChIP-seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Primed H3K27ac",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/ChIPseq/SRR1035436_primed_H3K27ac.bg.gz",
    "options": { "color": "brown" },
    "metadata": { "dataType": "ChIP-seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Naive H3K27ac",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/ChIPseq/SRR1035430_naive_H3K27ac.bg.gz",
    "options": { "color": "brown" },
    "metadata": { "dataType": "ChIP-seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Primed H3K9me3",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/ChIPseq/SRR1035437_primed_H3K9me3.bg.gz",
    "options": { "color": "brown" },
    "metadata": { "dataType": "ChIP-seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  },
  {
    "type": "bedgraph",
    "name": "Naive H3K9me3",
    "url": "https://regmedsrv1.wustl.edu/Public_SPACE/eric/Public_html/ChIPseq/SRR1035431_naive_H3K9me3.bg.gz",
    "options": { "color": "brown" },
    "metadata": { "dataType": "ChIP-seq", "cellType": "TSC", "cellLine": "W3MECP2", "platform": "ONT" }
  }
]