state (Emission order) Genome % CpGIsland.mm10.bed.gz RefSeqExon.mm10.bed.gz RefSeqGene.mm10.bed.gz RefSeqTES.mm10.bed.gz RefSeqTSS.mm10.bed.gz RefSeqTSS2kb.mm10.bed.gz 1 1.25547 52.35482 5.89884 1.83630 2.27497 36.44929 18.38606 2 1.52316 0.04239 0.73511 1.39958 1.07441 0.35454 1.78949 3 2.35562 0.16082 1.56047 1.65100 1.99076 1.18902 2.21861 4 3.98221 0.96875 3.54252 1.84774 3.94185 1.47179 2.31042 5 90.54239 0.14841 0.79090 0.92432 0.81906 0.38700 0.59175 6 0.34115 48.45917 6.10242 1.83286 2.81708 29.30495 18.13171 Base 100 0.38473 2.41702 36.75401 0.00095 0.00102 3.52912